Description

write your description here

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

summary{:bash}

:file

sequencing summary file

*.{txt}

Output

name:type
description
pattern

html{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.html{:bash}

:file

Results in HTML format

json{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.json{:bash}

:file

Results in JSON format

*.{json}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

pycoqc
GNU General Public v3 (GPL v3)

PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data